Insertion junction: CLIP2.034883_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034883
Chromosome:chromosome 9
Location:2362534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394100 AP1S1 (1 of 1) K12394 - AP-1 complex subunit sigma 1/2 (AP1S1_2); Sigma1-Adaptin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTGCGCCCTGGGAGCCCGTGCCCGTGCCTTCGCCTGTGCCAGCACCC
Internal bar code:ATATAGCTCGAACGCTTGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1470
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACATAGTCTACGGGGGC
Suggested primer 2:TCGTATCCATTCGCTCCTGC