Insertion junction: CLIP2.034890_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034890
Chromosome:chromosome 4
Location:3986537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00242258

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCTGAGCCCCATCGTGTCATTCCGCTGCCGTTCTCTGCCAAAGCTGC
Internal bar code:TCTGATTTGGTGTATTATCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2425
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCGCCACTCATACACTG
Suggested primer 2:GTCCAGGCAGGTCGTTAACA