Insertion junction: CLIP2.034891_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034891
Chromosome:chromosome 10
Location:6543484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465500 (1 of 1) 3.1.1.10 - Tropinesterase / Atropinesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACCAGCAGGGGAGGACGCCGCATGCGGCCGCCGCGTGTGTGGGGTTTC
Internal bar code:TAACTTGGGATCGTGCCATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:220
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAAACCCAGCGTGTGTG
Suggested primer 2:CACTCAACGCACGGTCAAAG