Insertion junction: CLIP2.034898_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034898
Chromosome:chromosome 7
Location:904664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800773 (1 of 1) PF00515//PF07719//PF13414//PF13637 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATGGGGTTTGGCTGTGGCTGTAGCCATGCCTAAGACAGCTCCATCTAA
Internal bar code:TTTATACTGAATAAGGCCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:873
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGTGCTACTGCTACTGC
Suggested primer 2:GTCTCTCACTCACTCCCCCT