Insertion junction: CLIP2.034900_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034900
Chromosome:chromosome 12
Location:2076390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510300 UBC21 E2 Ubiquitin conjugating enzyme; (1 of 1) PF00179//PF10408 - Ubiquitin-conjugating enzyme (UQ_con) // Ubiquitin elongating factor core (Ufd2P_core) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGCATGGGCGGCTGCCCCCGCAGGTCAAGGTGGTCACGGACAGCGCC
Internal bar code:AAACCCGAGTCGCTGGGATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1169
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTGTAAGAGCAGCGTT
Suggested primer 2:CGTCAGGCCATATTGCAAGC