Insertion junction: CLIP2.034903_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034903
Chromosome:chromosome 8
Location:4356329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384850 SDR16 Short-chain dehydrogenase/reductase; (1 of 5) 1.3.1.38 - Trans-2-enoyl-CoA reductase (NADPH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCCGCCAGCGGTGCGGTGTGTGTGCCCGTGTGGGGAGGAGCAGGCTC
Internal bar code:AGTTGTTCCCCTTGTCGCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:630
LEAP-Seq percent confirming:27.4725
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTGCAATCTCTCAAGCA
Suggested primer 2:CACACAATCTCGTCCTCCCC