Insertion junction: CLIP2.034903_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034903
Chromosome:chromosome 12
Location:1970334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCGCACCAGTGCCATGCCTGCATTGTCGGATCCCCAAGCCCATGTCA
Internal bar code:ACCCACTAGTGGCCACGTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2175
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATAGTCAGCCTGGTGGA
Suggested primer 2:ACCTCACTGAACTCAAGGCG