Insertion junction: CLIP2.034912_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034912
Chromosome:chromosome 16
Location:541150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692550 MSH4 DNA mismatch repair protein, MutS homolog; (1 of 1) K08740 - DNA mismatch repair protein MSH4 (MSH4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAACCACACAATATTACAAGCATACACATGTACGACACACACTTACAA
Internal bar code:AGTTTCTAACTCACCGTGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGACAGGAGGTGGGAGG
Suggested primer 2:TACCCGTGCCCATACCTGTA