Insertion junction: CLIP2.034920_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034920
Chromosome:chromosome 12
Location:4571120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521600 EEP7 (1 of 90) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos); Endonuclease/exonuclease/phosphatase family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCACCACCGCCCCCCTCCACGACTGCCCTCTGAACACCACCAACACCA
Internal bar code:GGCACCATGTAGCCCAAGACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:498
LEAP-Seq percent confirming:55.1724
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTTGCTTGGCTGCGTAC
Suggested primer 2:AGAGCGAAGAGAACCAGCAC