Insertion junction: CLIP2.034946_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034946
Chromosome:chromosome 12
Location:9037618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544750 (1 of 1) PF13637//PF13857 - Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGAGGAGATGAAGACGAGTCGAGGGGGGAGCACATAAACATGGGCGTG
Internal bar code:GTGTTGGGGTACACCTTGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1055
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTGGCTACTTGTGTCTG
Suggested primer 2:CGACACGCATGCAGGTTATG