Insertion junction: CLIP2.034946_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034946
Chromosome:chromosome 12
Location:9037621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544750 (1 of 1) PF13637//PF13857 - Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATAAGTCAATCATGCATGGACCCCCCCTTTACTAGTAGGGCCCGCCC
Internal bar code:GTGTTGGGGTACACCTTGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:725
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGACACGCATGCAGGTTATG
Suggested primer 2:TGGCTGGCTACTTGTGTCTG