Insertion junction: CLIP2.034947_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034947
Chromosome:chromosome 1
Location:346710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g002050 APT1 Acid phosphatase; (1 of 1) K01078 - acid phosphatase (E3.1.3.2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGTGTCACAGCAGCAGTACGGCGGTTCGGCAACAGCCGCAGGCAGCC
Internal bar code:CATTACTTCAACCGCATAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:177
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTCAGGTGGGAGCATGA
Suggested primer 2:ATATATGTTGGGCAGCGGGG