Insertion junction: CLIP2.034956_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034956
Chromosome:chromosome 9
Location:5160605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801066 (1 of 1) IPR000742//IPR000772//IPR001881//IPR003882//IPR009030 - EGF-like domain // Ricin B, lectin domain // EGF-like calcium-binding domain // Pistil-specific extensin-like protein // Insulin-like growth factor binding protein, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACCTGCATAAAGCCCGAGCACTATGATGTTCAGGATGATGTCCAAT
Internal bar code:GACTTGGTACGCGGTAACTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1541
LEAP-Seq percent confirming:71.831
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCACCCAGGCACCAAAGT
Suggested primer 2:AGGAGTTGAAGCCGGACTTG