Insertion junction: CLIP2.034958_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034958
Chromosome:chromosome 12
Location:6538995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538050 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGAGAGCTCTGGACATTGTAAGGCTCAGTAAGCTAAGTTGTCGCTGC
Internal bar code:GATGCCGGTGCTGCGGGGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1659
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTATCGCAACTTGGCCAT
Suggested primer 2:AAGCTCAATGGCCACGTACA