Insertion junction: CLIP2.034965_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034965
Chromosome:chromosome 11
Location:1759608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACCGGCGTCACCATCAGCAGCCGCGGCGGCAGCGCCTGCCGCCAGCA
Internal bar code:TAACAGTGAGAGGTTGACAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1305
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCATTTTCCCCCGGAAGTCG
Suggested primer 2:CACCTGTCCCACAGCACTAG