Insertion junction: CLIP2.034979_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034979
Chromosome:chromosome 6
Location:8122608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305650 PAO6,Tic55-like4,TIC55-4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGACAGGGGAAACGCAGACCGTGCAAGTGTGTGTGCCCGCAGTGGGCG
Internal bar code:CCTGTGTTAGCTGCTTCTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1383
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGAGGGGGATTAAGAGG
Suggested primer 2:AGCCTAACAAACCGTGCGTA