Insertion junction: CLIP2.034982_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034982
Chromosome:chromosome 10
Location:6384924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464264 (1 of 1) PTHR13355:SF12 - GCN5-RELATED N-ACETYLTRANSFERASE (GNAT) FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAACACTATGGGGAGAGGGCGAGTTAGCGGTGGCACTGCGACTTTACGG
Internal bar code:ATCGGGGCTTATATTGGTGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:368
LEAP-Seq percent confirming:72.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAAGGTCAGAGGCTTCA
Suggested primer 2:CGTGTGTGCATTGTGTGTGT