Insertion junction: CLIP2.034990_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034990
Chromosome:chromosome 12
Location:1369931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489000 (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACCCCCGAGCCCCAACCCGCCCAAACGAGCTAGGTGGAGCAACGCAT
Internal bar code:ATCTTACTGGTAAGTAGTCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1363
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCATAGCCACACAGAACT
Suggested primer 2:ATCATCCACTGCCGCCTTAC