Insertion junction: CLIP2.034995_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034995
Chromosome:chromosome 7
Location:3345195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334950 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCGAAGCGCGGTGTCACTATCCCAGTTGCTCCGTGCTCTTTACCTGCA
Internal bar code:GGGGTACACTTAAGTAAATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1140
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTTCGACATGCCTGAC
Suggested primer 2:AATGGCATGCGGGGAACTTA