Insertion junction: CLIP2.035000_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035000
Chromosome:chromosome 2
Location:4931419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110100 MLO1 (1 of 1) PTHR10891//PTHR31942//PTHR31942:SF1 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // FAMILY NOT NAMED // MLO-LIKE PROTEIN 1; MLO family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAATGCAGCATTTGCAAGAGAGGGAACAACAGCGTGAGAGGGCGAGA
Internal bar code:CTCTAACGTACTACTGTGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2219
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCCAAGAACGTGATCT
Suggested primer 2:GAACACTTGTCACGGTTGCC