Insertion junction: CLIP2.035008_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035008
Chromosome:chromosome 16
Location:602580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692150 GT90-29,GT90F29 (1 of 11) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase; GT90 family protein 29 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCGGGAGGGAAACACGTTCGCCATCAAGTGAGTGCGCGTCGGCGCGC
Internal bar code:GGCGAACCGGGAAACTATCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1551
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAGGGACTTGTACCGCA
Suggested primer 2:GCAATCAGGGCAAGGTCTCT