Insertion junction: CLIP2.035021_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035021
Chromosome:chromosome 2
Location:6536271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389050 CNX5,MAW4 (1 of 2) PTHR16861//PTHR16861:SF4 - GLYCOPROTEIN 38 // PODOPLANIN; Membrane-associated hydroxyproline-rich glycoprotein 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTCATCCGTAGAGAAAAACACAAAGCCTGTTAGGGAAGGAGCATTGG
Internal bar code:GCGAGACACGGCTGCGGAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:623
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTCCGTTCAAGTGCACG
Suggested primer 2:CTCACTTACTTGGCGGGTGT