Insertion junction: CLIP2.035023_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035023
Chromosome:chromosome 7
Location:2379682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328550 VPS18 Subunit of the VPS-C complex; (1 of 1) PF05131 - Pep3/Vps18/deep orange family (Pep3_Vps18) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTAGGCGTGCTGGGTAAACGTTGTTTAGCGCGCCCAGGGTGCGGAGC
Internal bar code:TTACGTTGCTTAAAGAGATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1010
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCACACACTCATACCCC
Suggested primer 2:CATGCCTGTGTGTGTGTGTG