Insertion junction: CLIP2.035025_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035025
Chromosome:chromosome 8
Location:3233695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376900 (1 of 1) PF10170 - Cysteine-rich domain (C6_DPF) CDS
Cre08.g376950 MMP14 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTAAACGGCGCTTCAAACTGGCAAATGGCGCAGTGGAAAGTCTCCAT
Internal bar code:AGGCACTCCCAATTGTCGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2170
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAACGGAATAGGGGGTT
Suggested primer 2:TAGTGAGTGCATGGTGCCAG