Insertion junction: CLIP2.035043_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035043
Chromosome:chromosome 12
Location:4365230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801409 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTCGTCTCCAGACGTTTGTGACTTTGGGTATCAGGCCAAAGGGTTGG
Internal bar code:TTGCTGGTATGTGGGTTGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2496
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GACGACCGACCCTGAACTTT
Suggested primer 2:GTGGTCGCTGAAATGGGAGA