Insertion junction: CLIP2.035062_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035062
Chromosome:chromosome 8
Location:1273881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363837 POLG1X,POL1A (1 of 1) IPR001098//IPR002298//IPR012337 - DNA-directed DNA polymerase, family A, palm domain // DNA polymerase A // Ribonuclease H-like domain; Putative DNA polymerase gamma, organellar intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGAAAATACCAGCCCAAACTAAACCAAAACCTACTAAAAAGAGCGGA
Internal bar code:GGTCGTGCCGGAAATGGCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACATGGACTTTGCGGAT
Suggested primer 2:ACAGATACAGACCCCTCCCC