Insertion junction: CLIP2.035066_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035066
Chromosome:chromosome 12
Location:6953720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00238175

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAAACAGGCTACGTGAACATGATTAGCCAGAATCCCGCTGCCACCGCT
Internal bar code:GGATCCTATTATATGGTGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2540
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCGCCAAGATGGACTTC
Suggested primer 2:GACAGCACAGACCGTTCAGA