Insertion junction: CLIP2.035067_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035067
Chromosome:chromosome 17
Location:5795675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741250 PHR1,PHR6 (1 of 1) 2.5.1.77 - 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; 7%252C8-didemethyl-8-hydroxy-5-deazariboflavin synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACATGTGTG
Internal bar code:CCCCGTCCCGTAATTAATAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2548
LEAP-Seq percent confirming:95.1613
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTTCCAGGCGCATAACA
Suggested primer 2:CAACATGTCGATCGTCGCAC