Insertion junction: CLIP2.035073_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035073
Chromosome:chromosome 17
Location:4487757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731150 (1 of 2) PTHR22811//PTHR22811:SF31 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // RE49489P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCACCGGCCACAGCGGCAGCGGCCCGCTGAGCCCGTGCACAGCTGAC
Internal bar code:AAAGCTCCTGCTTATTTGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1142
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCCTACTCCGTGCTCCA
Suggested primer 2:TCACTGTTGCTGCAAATGCC