Insertion junction: CLIP2.035079_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035079
Chromosome:chromosome 17
Location:4987378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735750 EFH11 EF-hand Calcium binding protein; (1 of 3) IPR000104//IPR002048 - Antifreeze protein, type I // EF-hand domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACGCTCTTGCGTCCGCGCGCTCGCGTCCACGCAGGCGCCGTCTAGCT
Internal bar code:GACTTACTGTGGTGGTCCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:977
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTTTTGTTGCCGTACAG
Suggested primer 2:TCGGCGGGATCGATAAGTTG