Insertion junction: CLIP2.035083_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035083
Chromosome:chromosome 3
Location:8366409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800397 (1 of 1) K18735 - protein SMG9 (SMG9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAACACGCGGGGAGCTGTGTGTTAGAAAAAAACAACAAAACGGGGAG
Internal bar code:TGATCCCGTAATGAGTTCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2577
LEAP-Seq percent confirming:98.4127
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGATCCGACATTTCGC
Suggested primer 2:GTTGGCCACATAGCAGGTCT