Insertion junction: CLIP2.035084_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035084
Chromosome:chromosome 7
Location:3525414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACCCGCCCCCATTCACGGTGGGCCAAATCGGCTGCCGGTCCGCAACA
Internal bar code:TATTCAATCTCATTATATTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1966
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGGTTTTCACGTGACG
Suggested primer 2:GGGTGAAAAATGTGCGCTGT