Insertion junction: CLIP2.035091_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035091
Chromosome:chromosome 13
Location:1429041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572050 SMG1 (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1); Nonsense-mediated decay (NMD) pathway protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCGGAGCTGCTGCGCCGCCGCGAGGCCTTGCTGGGCGGCGCGCTGG
Internal bar code:GGGTAAGGAAGGAGATTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCAATGCTCCCACTGAC
Suggested primer 2:CTGGCATGTTTGGGTAGGGT