Insertion junction: CLIP2.035101_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035101
Chromosome:chromosome 7
Location:3420586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800811 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAGCAGGCATACACCCCGGGTTGTCGCACAGCCACAGCCGGCGGCCG
Internal bar code:GCTGAACGTGGGTGTTAACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3258
LEAP-Seq percent confirming:92.1569
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTCTCAAAAGGGCTCAC
Suggested primer 2:TCGTCATCGCTAATCCAGGC