Insertion junction: CLIP2.035105_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035105
Chromosome:chromosome 4
Location:2494894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222050 (1 of 3) K16489 - protein SFI1 (SFI1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTACCCCAGAGGCAAAGGCGCAAGCGAGTTGAGTGGGTGCATGTCGT
Internal bar code:TCCCCGTAGAGTCGGGTCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3399
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTTTTGCGTGTGTTGC
Suggested primer 2:ACTTCCTCACAACGGCCTTC