Insertion junction: CLIP2.035105_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035105
Chromosome:chromosome 4
Location:2494900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222050 (1 of 3) K16489 - protein SFI1 (SFI1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAAGCCCGTGGACACGGCCGACGAGTACTGTCCGTTGCCGTCATTGG
Internal bar code:TATGCGCCTTATATGGACTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:546
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCCTCACAACGGCCTTC
Suggested primer 2:CGTGTTTTTGCGTGTGTTGC