Insertion junction: CLIP2.035111_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035111
Chromosome:chromosome 4
Location:637151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217945 FAD5D Putative Linoleate desaturase; (1 of 2) K00507 - stearoyl-CoA desaturase (delta-9 desaturase) (SCD, desC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCATCCCTCTCAAGTCTCAACCCCACAGCTCCACCTTGGCAAAGGCCT
Internal bar code:GCAGGGGGATGGAACCAACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4159
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACCCCGGACCCTCTTAC
Suggested primer 2:AGCTCACGTCTGTGTCTGTG