Insertion junction: CLIP2.035112_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035112
Chromosome:chromosome 13
Location:595991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565600 CPZ (1 of 1) PTHR12756//PTHR12756:SF8 - ATP/GTP-BINDING MOTIF CONTAINING PROTEIN RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCCCTCGACCGACACGCAGCGCTGCTGGGGCGCCTGCAGGGGGCGGC
Internal bar code:TGTCTATATGTGCCGGAAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:831
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCGCCCCTAAACTTCT
Suggested primer 2:TACGCGCAGGTGGTTTAACT