Insertion junction: CLIP2.035113_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035113
Chromosome:chromosome 10
Location:5104168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455190 (1 of 1) PF04989 - Cephalosporin hydroxylase (CmcI) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTCAGCGGCGGCGGCGGCGGTGACAGGCGCGGTGGCAAGCCGCAGCCT
Internal bar code:TTCGAAGGGATTCCATGCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAGGGTTCCATGCATGA
Suggested primer 2:TGTTTGCCAATGTGTGCTCG