Insertion junction: CLIP2.035113_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035113
Chromosome:chromosome 10
Location:5104169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455190 (1 of 1) PF04989 - Cephalosporin hydroxylase (CmcI) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCTGAATCTGCCGCTGCCCCATACGTTGGGTCGCTTTCGCTGTCA
Internal bar code:TGATTAACTGATCAAATCCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:262
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTGCCAATGTGTGCTCG
Suggested primer 2:GGTGAGGGTTCCATGCATGA