Insertion junction: CLIP2.035114_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035114
Chromosome:chromosome 6
Location:5586026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287300 COG9 ankyrin repeat protein; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATAGTGTGCCTCCGGATGATGAGCCCGTCCTTTAGTTGCGCCGTCGC
Internal bar code:AATATGTGCCGCTTTACACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3905
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:AGACACGGCGACCAGAAAAT
Suggested primer 2:CACGTGACATGTCCGTACCA