Insertion junction: CLIP2.035115_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035115
Chromosome:chromosome 6
Location:2618789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270050 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase CDS
Cre06.g270100 SBE2a,SBE2 (1 of 3) 2.4.1.18 - 1,4-alpha-glucan branching enzyme / Glycogen branching enzyme; Starch Branching Enzyme 2 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTGGCGGCGCAGGCGGCTGTGCGGCAGTGCCTGCGTGTGGTGGCGG
Internal bar code:CGATTTATGTTGGCTGCTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1330
LEAP-Seq percent confirming:1.78571
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGACCGTGGTGCTGATTT
Suggested primer 2:GGTTCTACGACGACCTGCAA