Insertion junction: CLIP2.035117_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035117
Chromosome:chromosome 5
Location:2722246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240400 SOM2 (1 of 2) PTHR11746//PTHR11746:SF104 - O-METHYLTRANSFERASE // O-METHYLTRANSFERASE 10; S-adenosyl-L-methionine-dependent O-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCAATGGGGTGGGGGGTGGGTGGGACGGGACATGCGGGGCGTGGGGG
Internal bar code:AATGTTCAATCCGTAAAGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:211
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTATCGCTCCCATCACCCAC
Suggested primer 2:CCATCTCTAGCCGTGTGCAT