Insertion junction: CLIP2.035119_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035119
Chromosome:chromosome 2
Location:8025084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144802 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGGCGGGGCCCAAACCGGGCACTGCTCCGCCTGCTGGTGGACAAGT
Internal bar code:CACTGCCAAAGTTGTGGATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1354
LEAP-Seq percent confirming:16.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGGAGGGTAGAGTGAGT
Suggested primer 2:CCGTAGTTCAGGGTTGGTCC