Insertion junction: CLIP2.035123_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035123
Chromosome:chromosome 13
Location:2054411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576760 ELI6,ELIP6 Early light-induced LHC-like protein; (1 of 6) PTHR14154:SF5 - EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTAGGACAGGGTCCCGTAAGCACCCCCAGGCCTAACCTCGGCGAAGGA
Internal bar code:TAGCACGCCGTTAGTAAACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1919
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATGATGCCGCTGGATAT
Suggested primer 2:GCGCGCAATGTCTTTCTCAT