Insertion junction: CLIP2.035125_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035125
Chromosome:chromosome 7
Location:4710414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345250 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCAGGTCGCGGACGTGCGGGCGCTGCGCGAAAACGCACAGCAGCAGC
Internal bar code:CAATTAGGTCGGGACTTATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2369
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCTTCGCCCATGATTGT
Suggested primer 2:GAAGGAAGTCTGGTACGGGC