Insertion junction: CLIP2.035126_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035126
Chromosome:chromosome 6
Location:8291269
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307012 (1 of 5) PF13391 - HNH endonuclease (HNH_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATCGCCAGGCATACAGCTCCTGGCACGTACGCCAGGAGCTAGACCT
Internal bar code:CTGGGTTCGCCTCCTAGGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2982
LEAP-Seq percent confirming:65.2174
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTGGCGGTGAGTTGTTG
Suggested primer 2:AGGCGGATTCTCCTACCCTT