Insertion junction: CLIP2.035129_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035129
Chromosome:chromosome 15
Location:2943644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g643703 RLS9 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1); RegA/Rls-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGATCGGGCCCCGGTCGGATGATGTCAGCAGCGCGCCTTGCAGAGC
Internal bar code:TTGGGGGTAGGTTGCCAGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:92
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTTTGTGGAGTTTGGG
Suggested primer 2:CACTTCTGCTTGCAACCCAC