Insertion junction: CLIP2.035135_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035135
Chromosome:chromosome 1
Location:5542284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039500 FAP89 Flagellar Associated Protein 89; (1 of 3) PTHR22847:SF361 - JOUBERIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGCCCAAGCCCGAGGTGGCGCCGGTGCGCACGCTGCTGGCGGTGCTG
Internal bar code:TGTGGTACTTGATAGGGGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1484
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTAGGAGCAGGGAGGGAG
Suggested primer 2:CTTCGACGGGAAGCAGGTAG