Insertion junction: CLIP2.035137_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035137
Chromosome:chromosome 16
Location:1755954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654950 SRR3 Scavenger receptor cysteine rich (SRCR) protein; (1 of 18) PTHR19862:SF14 - WD REPEAT-CONTAINING PROTEIN 48 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACACCTTCCTGTGCCCTTCTGACGTGTTGTGGGATACTCCCTCAACGG
Internal bar code:CAATTCAAAATAAATCATTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2460
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGCTGCTACTGCCATC
Suggested primer 2:ACATCGGTAGCAGCAGTAGC